merge: Add generic trace reading library

This pull request adds a generic trace reading library to OpenDC. 
The library has been designed to support a wide range of trace formats 
and uses a streaming approach to improve performance of reading large traces.

* Add trace reading API
* Implement API for GWF format
* Implement API for SWF format
* Implement API for WTF format
* Implement API for Bitbrains format
* Implement API for Bitbrains Parquet format

**Breaking API Changes**

* `opendc-format` has been removed in favour of `opendc-trace-*`

4 files changed, 52 insertions, 11 deletions

diff --git a/opendc-experiments/opendc-experiments-tf20/build.gradle.kts b/opendc-experiments/opendc-experiments-tf20/build.gradle.kts
index b088045b..882c4894 100644
--- a/opendc-experiments/opendc-experiments-tf20/build.gradle.kts
+++ b/opendc-experiments/opendc-experiments-tf20/build.gradle.kts
@@ -34,8 +34,11 @@ dependencies {
     implementation(projects.opendcSimulator.opendcSimulatorCore)
     implementation(projects.opendcSimulator.opendcSimulatorCompute)
     implementation(projects.opendcTelemetry.opendcTelemetrySdk)
-    implementation(projects.opendcFormat)
     implementation(projects.opendcUtils)
 
     implementation(libs.kotlin.logging)
+    implementation(libs.jackson.module.kotlin) {
+        exclude(group = "org.jetbrains.kotlin", module = "kotlin-reflect")
+    }
+    implementation("org.jetbrains.kotlin:kotlin-reflect:1.5.30")
 }
diff --git a/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/TensorFlowExperiment.kt b/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/TensorFlowExperiment.kt
index 9a48aced..2153a862 100644
--- a/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/TensorFlowExperiment.kt
+++ b/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/TensorFlowExperiment.kt
@@ -55,7 +55,8 @@ public class TensorFlowExperiment : Experiment(name = "tf20") {
             .build()
         val meter = meterProvider.get("opendc-tf20")
 
-        val def = MLEnvironmentReader(TensorFlowExperiment::class.java.getResourceAsStream(environmentFile)).read().first()
+        val envInput = checkNotNull(TensorFlowExperiment::class.java.getResourceAsStream(environmentFile))
+        val def = MLEnvironmentReader().readEnvironment(envInput).first()
         val device = SimTFDevice(
             def.uid, def.meta["gpu"] as Boolean, coroutineContext, clock, meter, def.model.cpus[0],
             def.model.memory[0], LinearPowerModel(250.0, 60.0)
diff --git a/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MLEnvironmentReader.kt b/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MLEnvironmentReader.kt
index 3e61f508..3cdf28fd 100644
--- a/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MLEnvironmentReader.kt
+++ b/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MLEnvironmentReader.kt
@@ -25,8 +25,6 @@ package org.opendc.experiments.tf20.util
 import com.fasterxml.jackson.databind.ObjectMapper
 import com.fasterxml.jackson.module.kotlin.jacksonObjectMapper
 import com.fasterxml.jackson.module.kotlin.readValue
-import org.opendc.format.environment.EnvironmentReader
-import org.opendc.format.environment.MachineDef
 import org.opendc.simulator.compute.model.MachineModel
 import org.opendc.simulator.compute.model.MemoryUnit
 import org.opendc.simulator.compute.model.ProcessingNode
@@ -36,13 +34,16 @@ import java.io.InputStream
 import java.util.*
 
 /**
- * An [EnvironmentReader] for the TensorFlow experiments.
+ * An environment reader for the TensorFlow experiments.
  */
-public class MLEnvironmentReader(input: InputStream, mapper: ObjectMapper = jacksonObjectMapper()) : EnvironmentReader {
+public class MLEnvironmentReader {
+    /**
+     * The [ObjectMapper] to convert the format.
+     */
+    private val mapper = jacksonObjectMapper()
 
-    private val setup: Setup = mapper.readValue(input)
-
-    override fun read(): List<MachineDef> {
+    public fun readEnvironment(input: InputStream): List<MachineDef> {
+        val setup: Setup = mapper.readValue(input)
         var counter = 0
         return setup.rooms.flatMap { room ->
             room.objects.flatMap { roomObject ->
@@ -109,6 +110,4 @@ public class MLEnvironmentReader(input: InputStream, mapper: ObjectMapper = jack
             }
         }
     }
-
-    override fun close() {}
 }
diff --git a/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MachineDef.kt b/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MachineDef.kt
new file mode 100644
index 00000000..271f5923
--- /dev/null
+++ b/opendc-experiments/opendc-experiments-tf20/src/main/kotlin/org/opendc/experiments/tf20/util/MachineDef.kt
@@ -0,0 +1,38 @@
+/*
+ * Copyright (c) 2021 AtLarge Research
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in all
+ * copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ * SOFTWARE.
+ */
+
+package org.opendc.experiments.tf20.util
+
+import org.opendc.simulator.compute.model.MachineModel
+import org.opendc.simulator.compute.power.PowerModel
+import java.util.*
+
+/**
+ * A definition of a machine in a cluster.
+ */
+public data class MachineDef(
+    val uid: UUID,
+    val name: String,
+    val meta: Map<String, Any>,
+    val model: MachineModel,
+    val powerModel: PowerModel
+)